BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036B02SP1|AL430169
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1017 1842 0.0
>3x_Contig1017
Length = 3431
Score = 1842 bits (928), Expect = 0.0
Identities = 932/934 (99%)
Strand = Plus / Plus
Query: 1 gatcaaattcctcatcttcagtttcgttcttaatgaatgtttcgaaatcgttcaaatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gatcaaattcctcatcttcagtttcgttcttaatgaatgtttcgaaatcgttcaaatctt 787
Query: 61 caaacaccttgacgacttctccggacttggtggtgacattagcaaactttggtcctttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 caaacaccttgacgacttctccggacttggtggtgacattagcaaactttggtcctttat 847
Query: 121 ccttcttggtcatttctgtgaatattcttctctgatgtagagtgtgtctgtgtgttaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ccttcttggtcatttctgtgaatattcttctctgatgtagagtgtgtctgtgtgttaaaa 907
Query: 181 gttaatatatgtattaactattgcaaattgatgcttgtgtaccgatggtagcactcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 gttaatatatgtattaactattgcaaattgatgcttgtgtaccgatggtagcactcaaga 967
Query: 241 aaaaggaaaaacacataaacttagggtatacggcaaagaggattagcaaacttggagtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 aaaaggaaaaacacataaacttagggtatacggcaaagaggattagcaaacttggagtta 1027
Query: 301 ggattttaccctctatttatatgccacttttacctttgttgtcttatgtgtttttactcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 ggattttaccctctatttatatgccacttttacctttgttgtcttatgtgtttttactcc 1087
Query: 361 aacacccctaaccctaattccacatagatccaaccctaattccgcagaggtacaaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 aacacccctaaccctaattccacatagatccaaccctaattccgcagaggtacaaataaa 1147
Query: 421 cacaaccagctagagatagcacaccaccatgaggctaggttgcacataacacaccaccga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 cacaaccagctagagatagcacaccaccatgaggctaggttgcacataacacaccaccga 1207
Query: 481 attttttgctacccacttttcttcctctttgtctctataccaacccatttagtacccaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 attttttgctacccacttttcttcctctttgtctctataccaacccatttagtacccaca 1267
Query: 541 aataaactctggggtgtacggtaccaagcttcgccaaagagkatgcaacaaatgatgaat 600
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1268 aataaactctggggtgtacggtaccaagcttcgccaaagagaatgcaacaaatgatgaat 1327
Query: 601 atactgtgatgtagtgattgctcattgaataagtagcgttattcgaagtaaagaatagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 atactgtgatgtagtgattgctcattgaataagtagcgttattcgaagtaaagaatagaa 1387
Query: 661 aatcacaagactggggttaaagctgcatcaaataggcaaatgtgcggcgtatcatggttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 aatcacaagactggggttaaagctgcatcaaataggcaaatgtgcggcgtatcatggttt 1447
Query: 721 gcgcgcacggattatctaacaagtttttccaccacttaaaaattgagggagcgttccgca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 gcgcgcacggattatctaacaagtttttccaccacttaaaaattgagggagcgttccgca 1507
Query: 781 taattataattgctttttttgctgacatcggcatcctgacttcttcttttgtagtgctct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 taattataattgctttttttgctgacatcggcatcctgacttcttcttttgtagtgctct 1567
Query: 841 atttgtgagtggtgttaaaaaaacattcaaagtggcatgctattctaaggcaatatggaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 atttgtgagtggtgttaaaaaaacattcaaagtggcatgctattctaaggcaatatggaa 1627
Query: 901 acatgagagttcctctttgaatatctggagcycc 934
||||||||||||||||||||||||||||||| ||
Sbjct: 1628 acatgagagttcctctttgaatatctggagctcc 1661
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7538
Number of Sequences: 1807
Number of extensions: 7538
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)